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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015864210.1_cds_XP_016515911.1_28206
CDS Infomation

[gene=LOC107832564] [db_xref=GeneID:107832564] [protein=probable galacturonosyltransferase 12] [protein_id=XP_016515911.1] [location=join(23478..23700,24384..24439,24589..24744,24938..25528,25647..25949,26047..26331)] [gbkey=CDS]
Sequence

ATGCTAAAAGCAATGCAGCTCCACATATCACCAAGTCTAAGGCATGTCACTGTTCTCCCT
GCTAAAGGTTTCAAGGACTTTATTAAAGTAAAAGTTGGCTCCAAAAGATTATCGTATCGC
ATGGTCTTCTACTTCCTCCTGTTCCTTACTTTCCTGCTCCGGTTTGTCTTTGTGTTAACA
GCTATAGACACCATCGATGGAGAACGAAAATGTTCGACCCTAGGTTGCTTGGGGAAAAAA
ATTGGACCAAGGATTTTGGGGAAACGGCTTGAATCAACTGTTCCCGAGGTGATATACCAA
GTATTAGAGGAACCTTCGGACCAAACTGAAATGCGAACAAGGCCCGAATCTCCTCAAACA
TTAGATGAGTTTATTGCAGAAATGAAGGATGGAAGACCAGACGCAAAAACCTTTGCTGTC
AAGCTCAAAGCTATGGTCACACTGCTAGAACAGACGACGAGAACTGCCAAAATCCAAGAA
TACCTGTATCGACATGTGGCATCTAGTAGCATCCCAAAACAGCTGCACTGCCTTGCTCTC
AAGCTCGCGCATGAGCATTCCACCAATTCCAATGCCCGTCTCCAATTACCATCGCCTGAA
CTTGTCCCCGCCCTTGTTGATAACTCATACTTCCATTTCGTCCTTGCCTCTGACAATGTT
CTTTCTGCTTCAGTTGTTGCTTCATCACTCGTGCAGAATTTCTTGCGCCCTGAAAAAATA
GTCCTTCACATAATCACAGATAGAAAAACCTATGCACCTATGCAAGCTTGGTTTTCATTG
CATCCTTTAACACCGGCTGTCATTGAGGTTAAAGGGTTGCATCATTTCGATTGGTTCACA
AAGGGGAAGGTACCGGTTCTGGAAGCTATGGAGAAAGACCAAAAAGCTAGATCACAGTTC
AGGGGAGGGTCATCAGCAATTGTGGCAAACAAAACTGAGAAGCCTAAGATCATCGCAGCA
AAATTACAAGCACTCAGTCCCAAGTATAATTCACTAATGAACCACATAAGGATACATTTG
CCAGAGTTGTATCCCAGTCTGGATAAGGTAGTATTCCTGGATGATGACATCGTCGTTCAA
ACGGATCTTTCACCTCTATGGGACATTGACATGAATGGCAAGGTGAACGGAGCAGTGGAG
ACATGCAGGGGAGGGGACAAGTATGTCATGTCAAAGCGCTTCAAAAGTTATTTAAACTTC
TCCCATCCTCTAATAGCAAGAAGCTTTAATCCCAGCGAATGCGCGTGGGCCTATGGCATG
AATATTTTTGATCTAGAAGCATGGAGGAAAACAAATATAAGTCAGACATACCACTACTGG
CTCGAACAGAACTTGAAATCGGACCTAAGTTTATGGCAGCTAGGGACATTACCTCCTGGT
CTAATTGCATTTCATGGCCACGTCCACGCCATTGATCCCTTTTGGCACATGCTAGGACTG
GGGTACCAAGATAATACAACTGTAGCGGAAGCTCAAAATGCTGGTGTGATCCACTTCAAC
GGTCGAGCAAAACCTTGGCTAGATATAGCATTTCCACAACTTCGTCCATTGTGGACAAAG
TACGTTAACTTCTCTGATAAATTTATCAAAAGCTGTCATATTAGAGCATCTTGA

Peptide Sequence

PEP ID

XP_016515911.1
PEP Infomation

PREDICTED: probable galacturonosyltransferase 12 [Nicotiana tabacum]
Sequence

MLKAMQLHISPSLRHVTVLPAKGFKDFIKVKVGSKRLSYRMVFYFLLFLTFLLRFVFVLT
AIDTIDGERKCSTLGCLGKKIGPRILGKRLESTVPEVIYQVLEEPSDQTEMRTRPESPQT
LDEFIAEMKDGRPDAKTFAVKLKAMVTLLEQTTRTAKIQEYLYRHVASSSIPKQLHCLAL
KLAHEHSTNSNARLQLPSPELVPALVDNSYFHFVLASDNVLSASVVASSLVQNFLRPEKI
VLHIITDRKTYAPMQAWFSLHPLTPAVIEVKGLHHFDWFTKGKVPVLEAMEKDQKARSQF
RGGSSAIVANKTEKPKIIAAKLQALSPKYNSLMNHIRIHLPELYPSLDKVVFLDDDIVVQ
TDLSPLWDIDMNGKVNGAVETCRGGDKYVMSKRFKSYLNFSHPLIARSFNPSECAWAYGM
NIFDLEAWRKTNISQTYHYWLEQNLKSDLSLWQLGTLPPGLIAFHGHVHAIDPFWHMLGL
GYQDNTTVAEAQNAGVIHFNGRAKPWLDIAFPQLRPLWTKYVNFSDKFIKSCHIRAS

Transcript Sequence

Gene sequence data has not been registered.